Open Source OCaml (Objective Caml) Bio-Informatics Software
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OCaml (Objective Caml) Bio-Informatics Software
View 66 business solutionsBrowse free open source OCaml (Objective Caml) Bio-Informatics Software and projects below. Use the toggles on the left to filter open source OCaml (Objective Caml) Bio-Informatics Software by OS, license, language, programming language, and project status.
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A set of very optimized tools for indexing/querying huge genomes/files. Provided so far: a very fast exact mapper, and an unconstrained split-mapper
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Cellular Automata simulator. Native code (fast) and modular design: update rule, topology, time, measurement, initialization are independant. No GUI (for now...): configuration file (commented default automatically generated) overridable by command line.
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The Hybrid Calculus of Wrapped Compartments is a language for the modelling of biological processes; it combines the precision of a stochastic approach with the efficiency of a ODE-based one. HCWC-sim is a OCaml implementation of the HCWC calculus.
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